Welcome to Helicon’s documentation!

Helicon is a collection of tools for cryo-EM analysis of helical structures.

To install the helicon, one could check Installation on how to install the helicon properly. Check out the Tutorial of denovo3D section for further information, this include the tutorial of the 2D class in the EMPIAR-10940 dataset. For the helicon helicalPitch program, check out the Tutorial of helicalPitch section for the tutorial of the 2D class in the EMPIAR-10940 dataset.

Contents

• Installation
• Tutorial of denovo3D
  • 2D class deposited in the EMPIAR-10940 dataset
  • Low twist 2D class average image
• Tutorial of helicalPitch
  • star file of the 2D classification result from the EMPIAR 10940 dataset
• HILL Tutorial
  • Import Data:
  • Data Quality Assessment:
  • Example 1: VipA/VipB
  • Example 2: EMD-26987 F-Actin
  • Example 3: EMD-10129 TMV
  • Example 4: PHF Tau
  • Example 5: EMD-0260 SF Tau
• Useful notes for Helicon
• API